J3_8CRE_052
3D structure
- PDB id
- 8CRE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CC*GAUG*CUG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8CRE_052 not in the Motif Atlas
- Homologous match to J3_8C3A_058
- Geometric discrepancy: 0.051
- The information below is about J3_8C3A_058
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_34320.1
- Basepair signature
- cWW-F-cWW-F-cWW-F
- Number of instances in this motif group
- 1
Unit IDs
8CRE|1|AS|C|3263
8CRE|1|AS|C|3264
*
8CRE|1|AS|G|3280
8CRE|1|AS|A|3281
8CRE|1|AS|U|3282
8CRE|1|AS|G|3283
*
8CRE|1|AS|C|3353
8CRE|1|AS|U|3354
8CRE|1|AS|G|3355
Current chains
- Chain AS
- 25S
Nearby chains
- Chain AX
- 60S ribosomal protein L3
- Chain BK
- Ribosomal protein L22
- Chain BY
- 60S ribosomal protein L31-B
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