J3_8CRE_082
3D structure
- PDB id
- 8CRE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UUCUUAG*CGAGAC*GCAAUAA
- Length
- 20 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_04315.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F-F-cWW-cWW-F-F-F-F
- Number of instances in this motif group
- 1
Unit IDs
8CRE|1|CM|U|1267
8CRE|1|CM|U|1268
8CRE|1|CM|C|1269
8CRE|1|CM|U|1270
8CRE|1|CM|U|1271
8CRE|1|CM|A|1272
8CRE|1|CM|G|1273
*
8CRE|1|CM|C|1312
8CRE|1|CM|G|1313
8CRE|1|CM|A|1314
8CRE|1|CM|G|1315
8CRE|1|CM|A|1316
8CRE|1|CM|C|1317
*
8CRE|1|CM|G|1405
8CRE|1|CM|C|1406
8CRE|1|CM|A|1407
8CRE|1|CM|A|1408
8CRE|1|CM|U|1409
8CRE|1|CM|A|1410
8CRE|1|CM|A|1411
Current chains
- Chain CM
- 18S
Nearby chains
- Chain CL
- 60S ribosomal protein CAALFM_C304810CA
- Chain CP
- Ribosomal protein S5
- Chain CQ
- Ribosomal protein S3
- Chain DD
- 40S ribosomal protein S16
- Chain DE
- 40S ribosomal protein S17-B
- Chain DH
- Ribosomal protein S10
- Chain DQ
- 40S ribosomal protein S29A
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