J3_8CRX_005
3D structure
- PDB id
- 8CRX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cutibacterium acnes 70S ribosome with mRNA, P-site tRNA and Sarecycline bound
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- CAAG*CUAGUAA*UGAAUACG
- Length
- 19 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8CRX_005 not in the Motif Atlas
- Homologous match to J3_4LFB_002
- Geometric discrepancy: 0.0764
- The information below is about J3_4LFB_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_85722.2
- Basepair signature
- cWW-F-F-cSS-F-cWW-tHH-tWW-F-tWH-tHS-cSH-cWW
- Number of instances in this motif group
- 6
Unit IDs
8CRX|1|A|C|920
8CRX|1|A|A|921
8CRX|1|A|A|922
8CRX|1|A|G|923
*
8CRX|1|A|C|1330
8CRX|1|A|U|1331
8CRX|1|A|A|1332
8CRX|1|A|G|1333
8CRX|1|A|U|1334
8CRX|1|A|A|1335
8CRX|1|A|A|1336
*
8CRX|1|A|U|1359
8CRX|1|A|G|1360
8CRX|1|A|A|1361
8CRX|1|A|A|1362
8CRX|1|A|U|1363
8CRX|1|A|A|1364
8CRX|1|A|C|1365
8CRX|1|A|G|1366
Current chains
- Chain A
- RNA (1537-MER)
Nearby chains
- Chain I
- 30S ribosomal protein S7
- Chain J
- 30S ribosomal protein S9
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