J3_8CSP_001

3D structure

PDB id

8CSP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial small subunit assembly intermediate (State A)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.66 Å

Loop

Sequence

CUCU*ACCCCAG*CAAG

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8CSP|1|A|C|677
8CSP|1|A|U|678
8CSP|1|A|C|679
8CSP|1|A|U|680
*
8CSP|1|A|A|866
8CSP|1|A|C|867
8CSP|1|A|C|868
8CSP|1|A|C|869
8CSP|1|A|C|870
8CSP|1|A|A|871
8CSP|1|A|G|872
*
8CSP|1|A|C|917
8CSP|1|A|A|918
8CSP|1|A|A|919
8CSP|1|A|G|920

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain J

28S ribosomal protein S12, mitochondrial

Chain O

28S ribosomal protein S18b, mitochondrial