J3_8CSP_002

3D structure

PDB id

8CSP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial small subunit assembly intermediate (State A)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.66 Å

Loop

Sequence

GAUU*AUUAACCU*AGC

Length

15 nucleotides

Bulged bases

8CSP|1|A|A|688

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8CSP|1|A|G|687
8CSP|1|A|A|688
8CSP|1|A|U|689
8CSP|1|A|U|690
*
8CSP|1|A|A|823
8CSP|1|A|U|824
8CSP|1|A|U|825
8CSP|1|A|A|826
8CSP|1|A|A|827
8CSP|1|A|C|828
8CSP|1|A|C|829
8CSP|1|A|U|830
*
8CSP|1|A|A|856
8CSP|1|A|G|857
8CSP|1|A|C|858

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain J

28S ribosomal protein S12, mitochondrial

Chain M

28S ribosomal protein S16, mitochondrial

Chain T

28S ribosomal protein S25, mitochondrial