J3_8CSP_003

3D structure

PDB id

8CSP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial small subunit assembly intermediate (State A)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.66 Å

Loop

Sequence

CU*AAUAGAC*GG

Length

11 nucleotides

Bulged bases

8CSP|1|A|A|1019

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8CSP|1|A|C|973
8CSP|1|A|U|974
*
8CSP|1|A|A|1014
8CSP|1|A|A|1015
8CSP|1|A|U|1016
8CSP|1|A|A|1017
8CSP|1|A|G|1018
8CSP|1|A|A|1019
8CSP|1|A|C|1020
*
8CSP|1|A|G|1030
8CSP|1|A|G|1031

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain E

28S ribosomal protein S6, mitochondrial

Chain P

28S ribosomal protein S18c, mitochondrial

Chain a

GTPase Era, mitochondrial