J3_8CSP_004

3D structure

PDB id

8CSP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial small subunit assembly intermediate (State A)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.66 Å

Loop

Sequence

UGUAAUCG*CAC*GCAA

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8CSP|1|A|U|1210
8CSP|1|A|G|1211
8CSP|1|A|U|1212
8CSP|1|A|A|1213
8CSP|1|A|A|1214
8CSP|1|A|U|1215
8CSP|1|A|C|1216
8CSP|1|A|G|1217
*
8CSP|1|A|C|1236
8CSP|1|A|A|1237
8CSP|1|A|C|1238
*
8CSP|1|A|G|1351
8CSP|1|A|C|1352
8CSP|1|A|A|1353
8CSP|1|A|A|1354

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain 7

Methyltransferase-like protein 17, mitochondrial

Chain 8

Malonyl-CoA-acyl carrier protein transacylase, mitochondrial