J3_8CVM_014
3D structure
- PDB id
- 8CVM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cutibacterium acnes 50S ribosomal subunit with P-site tRNA and Sarecycline bound in the local refined map
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.66 Å
Loop
- Sequence
- CCAUAG*CGC*GACG
- Length
- 13 nucleotides
- Bulged bases
- 8CVM|1|b|C|109
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8CVM|1|b|C|11
8CVM|1|b|C|12
8CVM|1|b|A|13
8CVM|1|b|U|14
8CVM|1|b|A|15
8CVM|1|b|G|16
*
8CVM|1|b|C|68
8CVM|1|b|G|69
8CVM|1|b|C|70
*
8CVM|1|b|G|107
8CVM|1|b|A|108
8CVM|1|b|C|109
8CVM|1|b|G|110
Current chains
- Chain b
- 5S ribosomal RNA
Nearby chains
- Chain a
- Large subunit ribosomal RNA; LSU rRNA
- Chain n
- 50S ribosomal protein L18
- Chain u
- 50S ribosomal protein L25
- Chain v
- 50S ribosomal protein L27
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