J3_8E5T_004

3D structure

PDB id

8E5T (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast co-transcriptional Noc1-Noc2 RNP assembly checkpoint intermediate

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

UUC*GCGU*AGUG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8E5T|1|1|U|942
8E5T|1|1|U|943
8E5T|1|1|C|944
*
8E5T|1|1|G|1375
8E5T|1|1|C|1376
8E5T|1|1|G|1377
8E5T|1|1|U|1378
*
8E5T|1|1|A|1428
8E5T|1|1|G|1429
8E5T|1|1|U|1430
8E5T|1|1|G|1431

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain C

60S ribosomal protein L4-A

Chain D

Protein MAK16