3D structure

PDB id
8EIU (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S ribosome with A-loop mutations U2554C and U2555C
Experimental method
ELECTRON MICROSCOPY
Resolution
2.24 Å

Loop

Sequence
CUUG*CAG*CUUACG
Length
13 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_8EIU_008 not in the Motif Atlas
Homologous match to J3_4LFB_005
Geometric discrepancy: 0.124
The information below is about J3_4LFB_005
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_84394.1
Basepair signature
cWW-tWH-F-F-cWW-F-cWW-F
Number of instances in this motif group
2

Unit IDs

8EIU|1|A|C|990
8EIU|1|A|U|991
8EIU|1|A|U|992
8EIU|1|A|G|993
*
8EIU|1|A|C|1045
8EIU|1|A|A|1046
8EIU|1|A|G|1047
*
8EIU|1|A|C|1210
8EIU|1|A|U|1211
8EIU|1|A|U|1212
8EIU|1|A|A|1213
8EIU|1|A|C|1214
8EIU|1|A|G|1215

Current chains

Chain A
16S rRNA

Nearby chains

Chain N
30S ribosomal protein S14

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.1768 s