J3_8FKV_001
3D structure
- PDB id
- 8FKV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human nucleolar pre-60S ribosomal subunit (State D1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.47 Å
Loop
- Sequence
- CAGCG*CGUACG*CCGG
- Length
- 15 nucleotides
- Bulged bases
- 8FKV|1|L3|C|159
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8FKV|1|L3|C|112
8FKV|1|L3|A|113
8FKV|1|L3|G|114
8FKV|1|L3|C|115
8FKV|1|L3|G|116
*
8FKV|1|L3|C|155
8FKV|1|L3|G|156
8FKV|1|L3|U|157
8FKV|1|L3|A|158
8FKV|1|L3|C|159
8FKV|1|L3|G|160
*
8FKV|1|L3|C|275
8FKV|1|L3|C|276
8FKV|1|L3|G|277
8FKV|1|L3|G|278
Current chains
- Chain L3
- 28S rRNA
Nearby chains
- Chain L6
- 60S ribosomal protein L13
- Chain L9
- 60S ribosomal protein L15
- Chain LS
- 60S ribosomal protein L35
- Chain LU
- 60S ribosomal protein L36
- Chain SE
- 60S ribosomal protein L7a
- Chain SS
- Ribosome biogenesis protein BOP1
- Chain SW
- ATP-dependent RNA helicase DDX18
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