J3_8FKZ_006

3D structure

PDB id

8FKZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nucleolar pre-60S ribosomal subunit (State G)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.04 Å

Loop

Sequence

AGAUG*CAGU*AGGGUGUAAAU

Length

20 nucleotides

Bulged bases

8FKZ|1|L3|U|2763

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FKZ|1|L3|A|2551
8FKZ|1|L3|G|2552
8FKZ|1|L3|A|2553
8FKZ|1|L3|U|2554
8FKZ|1|L3|G|2555
*
8FKZ|1|L3|C|2572
8FKZ|1|L3|A|2573
8FKZ|1|L3|G|2574
8FKZ|1|L3|U|2575
*
8FKZ|1|L3|A|2757
8FKZ|1|L3|G|2758
8FKZ|1|L3|G|2759
8FKZ|1|L3|G|2760
8FKZ|1|L3|U|2761
8FKZ|1|L3|G|2762
8FKZ|1|L3|U|2763
8FKZ|1|L3|A|2764
8FKZ|1|L3|A|2765
8FKZ|1|L3|A|2766
8FKZ|1|L3|U|2767

Current chains

Chain L3

28S rRNA

Nearby chains

Chain LJ

60S ribosomal protein L27

Chain NL

Ribosome biogenesis protein NOP53

Chain SM

Pescadillo homolog