J3_8FL2_007

3D structure

PDB id

8FL2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State I1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.67 Å

Loop

Sequence

AGAUG*CAGU*AGGGUGUAAAU

Length

20 nucleotides

Bulged bases

8FL2|1|L3|U|2763

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FL2|1|L3|A|2551
8FL2|1|L3|G|2552
8FL2|1|L3|A|2553
8FL2|1|L3|U|2554
8FL2|1|L3|G|2555
*
8FL2|1|L3|C|2572
8FL2|1|L3|A|2573
8FL2|1|L3|G|2574
8FL2|1|L3|U|2575
*
8FL2|1|L3|A|2757
8FL2|1|L3|G|2758
8FL2|1|L3|G|2759
8FL2|1|L3|G|2760
8FL2|1|L3|U|2761
8FL2|1|L3|G|2762
8FL2|1|L3|U|2763
8FL2|1|L3|A|2764
8FL2|1|L3|A|2765
8FL2|1|L3|A|2766
8FL2|1|L3|U|2767

Current chains

Chain L3

28S rRNA

Nearby chains

Chain LJ

60S ribosomal protein L27

Chain NL

Ribosome biogenesis protein NOP53

Chain SM

Pescadillo homolog