3D structure

PDB id
8FL7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human nuclear pre-60S ribosomal subunit (State J2)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.55 Å

Loop

Sequence
CAGCG*CGUACG*CCGG
Length
15 nucleotides
Bulged bases
8FL7|1|L3|C|159
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8FL7|1|L3|C|112
8FL7|1|L3|A|113
8FL7|1|L3|G|114
8FL7|1|L3|C|115
8FL7|1|L3|G|116
*
8FL7|1|L3|C|155
8FL7|1|L3|G|156
8FL7|1|L3|U|157
8FL7|1|L3|A|158
8FL7|1|L3|C|159
8FL7|1|L3|G|160
*
8FL7|1|L3|C|275
8FL7|1|L3|C|276
8FL7|1|L3|G|277
8FL7|1|L3|G|278

Current chains

Chain L3
28S rRNA

Nearby chains

Chain L6
60S ribosomal protein L13
Chain L9
60S ribosomal protein L15
Chain LS
60S ribosomal protein L35
Chain LU
60S ribosomal protein L36
Chain SE
60S ribosomal protein L7a

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.0898 s