3D structure

PDB id
8FLA (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human nuclear pre-60S ribosomal subunit (State K1)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.63 Å

Loop

Sequence
CAGCG*CGUACG*CCGG
Length
15 nucleotides
Bulged bases
8FLA|1|L3|C|159
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8FLA|1|L3|C|112
8FLA|1|L3|A|113
8FLA|1|L3|G|114
8FLA|1|L3|C|115
8FLA|1|L3|G|116
*
8FLA|1|L3|C|155
8FLA|1|L3|G|156
8FLA|1|L3|U|157
8FLA|1|L3|A|158
8FLA|1|L3|C|159
8FLA|1|L3|G|160
*
8FLA|1|L3|C|275
8FLA|1|L3|C|276
8FLA|1|L3|G|277
8FLA|1|L3|G|278

Current chains

Chain L3
28S rRNA

Nearby chains

Chain L6
60S ribosomal protein L13
Chain L9
60S ribosomal protein L15
Chain LS
60S ribosomal protein L35
Chain LU
60S ribosomal protein L36
Chain NL
Ribosome biogenesis protein NOP53
Chain SE
60S ribosomal protein L7a

Coloring options:

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