J3_8FLD_006

3D structure

PDB id

8FLD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State L1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.58 Å

Loop

Sequence

AGAUG*CAGU*AGGGUGUAAAU

Length

20 nucleotides

Bulged bases

8FLD|1|L3|U|2763

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FLD|1|L3|A|2551
8FLD|1|L3|G|2552
8FLD|1|L3|A|2553
8FLD|1|L3|U|2554
8FLD|1|L3|G|2555
*
8FLD|1|L3|C|2572
8FLD|1|L3|A|2573
8FLD|1|L3|G|2574
8FLD|1|L3|U|2575
*
8FLD|1|L3|A|2757
8FLD|1|L3|G|2758
8FLD|1|L3|G|2759
8FLD|1|L3|G|2760
8FLD|1|L3|U|2761
8FLD|1|L3|G|2762
8FLD|1|L3|U|2763
8FLD|1|L3|A|2764
8FLD|1|L3|A|2765
8FLD|1|L3|A|2766
8FLD|1|L3|U|2767

Current chains

Chain L3

28S rRNA

Nearby chains

Chain LJ

60S ribosomal protein L27

Chain NL

Ribosome biogenesis protein NOP53

Chain SM

Pescadillo homolog