J3_8FLD_009

3D structure

PDB id

8FLD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State L1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.58 Å

Loop

Sequence

UAUC*GU(PSU)(OMG)G*CCACUAAUA

Length

18 nucleotides

Bulged bases

8FLD|1|L3|A|4464, 8FLD|1|L3|U|4465

QA status

Modified nucleotides: PSU, OMG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FLD|1|L3|U|4463
8FLD|1|L3|A|4464
8FLD|1|L3|U|4465
8FLD|1|L3|C|4466
*
8FLD|1|L3|G|4491
8FLD|1|L3|U|4492
8FLD|1|L3|PSU|4493
8FLD|1|L3|OMG|4494
8FLD|1|L3|G|4495
*
8FLD|1|L3|C|4505
8FLD|1|L3|C|4506
8FLD|1|L3|A|4507
8FLD|1|L3|C|4508
8FLD|1|L3|U|4509
8FLD|1|L3|A|4510
8FLD|1|L3|A|4511
8FLD|1|L3|U|4512
8FLD|1|L3|A|4513

Current chains

Chain L3

28S rRNA

Nearby chains

Chain LG

60S ribosomal protein L23

Chain LN

60S ribosomal protein L3

Chain NK

Protein LLP homolog