J3_8FRU_004

3D structure

PDB id

8FRU (explore in PDB, NAKB, or RNA 3D Hub)

Description

60S subunit of the Giardia lamblia 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.49 Å

Loop

Sequence

GACG*CGAC*GAC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FRU|1|1|G|1170
8FRU|1|1|A|1171
8FRU|1|1|C|1172
8FRU|1|1|G|1173
*
8FRU|1|1|C|1470
8FRU|1|1|G|1471
8FRU|1|1|A|1472
8FRU|1|1|C|1473
*
8FRU|1|1|G|1482
8FRU|1|1|A|1483
8FRU|1|1|C|1484

Current chains

Chain 1

28S rRNA

Nearby chains

Chain R

60S ribosomal protein eL19

Chain g

60S ribosomal protein eL34

Chain j

60S ribosomal protein eL37

Chain l

60S ribosomal protein eL39