J3_8FRU_005
3D structure
- PDB id
- 8FRU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 60S subunit of the Giardia lamblia 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.49 Å
Loop
- Sequence
- GGCGG*CGG*CCC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8FRU|1|1|G|1220
8FRU|1|1|G|1221
8FRU|1|1|C|1222
8FRU|1|1|G|1223
8FRU|1|1|G|1224
*
8FRU|1|1|C|1233
8FRU|1|1|G|1234
8FRU|1|1|G|1235
*
8FRU|1|1|C|1251
8FRU|1|1|C|1252
8FRU|1|1|C|1253
Current chains
- Chain 1
- 28S rRNA
Nearby chains
- Chain 4
- 5.8S rRNA
- Chain A
- 60S ribosomal protein uL2
- Chain G
- 60S ribosomal protein eL8
- Chain N
- 60S ribosomal protein eL15
- Chain X
- 60S ribosomal protein uL23
- Chain j
- 60S ribosomal protein eL37
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