J3_8FRU_011

3D structure

PDB id

8FRU (explore in PDB, NAKB, or RNA 3D Hub)

Description

60S subunit of the Giardia lamblia 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.49 Å

Loop

Sequence

CGCC*GG*CGGCG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FRU|1|1|C|109
8FRU|1|1|G|110
8FRU|1|1|C|111
8FRU|1|1|C|112
*
8FRU|1|1|G|130
8FRU|1|1|G|131
*
8FRU|1|1|C|215
8FRU|1|1|G|216
8FRU|1|1|G|217
8FRU|1|1|C|218
8FRU|1|1|G|219

Current chains

Chain 1

28S rRNA

Nearby chains

Chain G

60S ribosomal protein eL8

Chain N

60S ribosomal protein eL15

Chain h

60S ribosomal protein uL29

Chain i

60S ribosomal protein eL36