J3_8G2U_002

3D structure

PDB id

8G2U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-resolved cryo-EM study of the 70S recycling by the HflX:control-apo-70S at 900ms

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UGAUCUA*UGG*CAAA

Length

14 nucleotides

Bulged bases

8G2U|1|B|U|686, 8G2U|1|B|A|792

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_8G2U_002 not in the Motif Atlas

Homologous match to J3_5J7L_038

Geometric discrepancy: 0.0663

The information below is about J3_5J7L_038

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_64189.2

Basepair signature

cWW-tWH-cWW-tSW-F-F-cWW

Number of instances in this motif group

7

Unit IDs

8G2U|1|B|U|683
8G2U|1|B|G|684
8G2U|1|B|A|685
8G2U|1|B|U|686
8G2U|1|B|C|687
8G2U|1|B|U|688
8G2U|1|B|A|689
*
8G2U|1|B|U|773
8G2U|1|B|G|774
8G2U|1|B|G|775
*
8G2U|1|B|C|791
8G2U|1|B|A|792
8G2U|1|B|A|793
8G2U|1|B|A|794

Current chains

Chain B

23S rRNA

Nearby chains

Chain 2

50S ribosomal protein L34

Chain C

50S ribosomal protein L2