J3_8G2U_020
3D structure
- PDB id
- 8G2U (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Time-resolved cryo-EM study of the 70S recycling by the HflX:control-apo-70S at 900ms
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GC*GCGAAAAGAAC*GAGUGAAAAAGAACC
- Length
- 28 nucleotides
- Bulged bases
- 8G2U|1|B|A|504, 8G2U|1|B|A|508
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8G2U_020 not in the Motif Atlas
- Homologous match to J3_7A0S_015
- Geometric discrepancy: 0.1147
- The information below is about J3_7A0S_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_17917.1
- Basepair signature
- cWW-tWH-cSS-cWW-tSH-tHH-cWW-F-F-tWW-tSS-cSS-tWW-tSH-tWH-cSW-F-tHS-cWW-F
- Number of instances in this motif group
- 9
Unit IDs
8G2U|1|B|G|30
8G2U|1|B|C|31
*
8G2U|1|B|G|474
8G2U|1|B|C|475
8G2U|1|B|G|476
8G2U|1|B|A|477
8G2U|1|B|A|478
8G2U|1|B|A|479
8G2U|1|B|A|480
8G2U|1|B|G|481
8G2U|1|B|A|482
8G2U|1|B|A|483
8G2U|1|B|C|484
*
8G2U|1|B|G|496
8G2U|1|B|A|497
8G2U|1|B|G|498
8G2U|1|B|U|499
8G2U|1|B|G|500
8G2U|1|B|A|501
8G2U|1|B|A|502
8G2U|1|B|A|503
8G2U|1|B|A|504
8G2U|1|B|A|505
8G2U|1|B|G|506
8G2U|1|B|A|507
8G2U|1|B|A|508
8G2U|1|B|C|509
8G2U|1|B|C|510
Current chains
- Chain B
- 23S rRNA
Nearby chains
- Chain Q
- 50S ribosomal protein L20
- Chain S
- 50S ribosomal protein L22
- Chain U
- 50S ribosomal protein L24
Coloring options: