J3_8G2U_034

3D structure

PDB id

8G2U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-resolved cryo-EM study of the 70S recycling by the HflX:control-apo-70S at 900ms

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUUGACAU*ACAG*CUUACG

Length

18 nucleotides

Bulged bases

8G2U|1|v|U|1212, 8G2U|1|v|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_8G2U_034 not in the Motif Atlas

Homologous match to J3_5J7L_053

Geometric discrepancy: 0.2076

The information below is about J3_5J7L_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_76475.2

Basepair signature

cWW-tWH-F-tHS-cWW-cWW-F-cWS-cWS-cWW

Number of instances in this motif group

2

Unit IDs

8G2U|1|v|C|990
8G2U|1|v|U|991
8G2U|1|v|U|992
8G2U|1|v|G|993
8G2U|1|v|A|994
8G2U|1|v|C|995
8G2U|1|v|A|996
8G2U|1|v|U|997
*
8G2U|1|v|A|1044
8G2U|1|v|C|1045
8G2U|1|v|A|1046
8G2U|1|v|G|1047
*
8G2U|1|v|C|1210
8G2U|1|v|U|1211
8G2U|1|v|U|1212
8G2U|1|v|A|1213
8G2U|1|v|C|1214
8G2U|1|v|G|1215

Current chains

Chain v

16S rRNA

Nearby chains

Chain m

30S ribosomal protein S14