3D structure

PDB id
8G31 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Time-resolved cryo-EM study of the 70S recycling by the HflX:2nd Intermediate
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
UCUUG*CAG*CUUACG
Length
14 nucleotides
Bulged bases
8G31|1|v|C|1214
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_8G31_013 not in the Motif Atlas
Homologous match to J3_5J7L_007
Geometric discrepancy: 0.2801
The information below is about J3_5J7L_007
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_82572.1
Basepair signature
cWW-tSH-tWW-F-cWW-tHW-F-F-cWW
Number of instances in this motif group
2

Unit IDs

8G31|1|v|U|989
8G31|1|v|C|990
8G31|1|v|U|991
8G31|1|v|U|992
8G31|1|v|G|993
*
8G31|1|v|C|1045
8G31|1|v|A|1046
8G31|1|v|G|1047
*
8G31|1|v|C|1210
8G31|1|v|U|1211
8G31|1|v|U|1212
8G31|1|v|A|1213
8G31|1|v|C|1214
8G31|1|v|G|1215

Current chains

Chain v
16S

Nearby chains

Chain m
30S ribosomal protein S14

Coloring options:


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