3D structure

PDB id
8G31 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Time-resolved cryo-EM study of the 70S recycling by the HflX:2nd Intermediate
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
GGAUGUUG*CAUCAUUUAAAGAAAG*CUCAC
Length
29 nucleotides
Bulged bases
8G31|1|B|U|1058, 8G31|1|B|G|1059, 8G31|1|B|U|1060, 8G31|1|B|U|1061, 8G31|1|B|C|1079, 8G31|1|B|A|1080, 8G31|1|B|U|1083, 8G31|1|B|A|1088
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8G31|1|B|G|1055
8G31|1|B|G|1056
8G31|1|B|A|1057
8G31|1|B|U|1058
8G31|1|B|G|1059
8G31|1|B|U|1060
8G31|1|B|U|1061
8G31|1|B|G|1062
*
8G31|1|B|C|1076
8G31|1|B|A|1077
8G31|1|B|U|1078
8G31|1|B|C|1079
8G31|1|B|A|1080
8G31|1|B|U|1081
8G31|1|B|U|1082
8G31|1|B|U|1083
8G31|1|B|A|1084
8G31|1|B|A|1085
8G31|1|B|A|1086
8G31|1|B|G|1087
8G31|1|B|A|1088
8G31|1|B|A|1089
8G31|1|B|A|1090
8G31|1|B|G|1091
*
8G31|1|B|C|1100
8G31|1|B|U|1101
8G31|1|B|C|1102
8G31|1|B|A|1103
8G31|1|B|C|1104

Current chains

Chain B
23S

Nearby chains

Chain 4
50S ribosomal protein L36

Coloring options:

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