3D structure

PDB id
8G31 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Time-resolved cryo-EM study of the 70S recycling by the HflX:2nd Intermediate
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
GGUUUAAUUC*GAAGAACCUUACCUG*CCAGGGCUACAC
Length
37 nucleotides
Bulged bases
8G31|1|v|A|975, 8G31|1|v|G|976, 8G31|1|v|A|978
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8G31|1|v|G|953
8G31|1|v|G|954
8G31|1|v|U|955
8G31|1|v|U|956
8G31|1|v|U|957
8G31|1|v|A|958
8G31|1|v|A|959
8G31|1|v|U|960
8G31|1|v|U|961
8G31|1|v|C|962
*
8G31|1|v|G|973
8G31|1|v|A|974
8G31|1|v|A|975
8G31|1|v|G|976
8G31|1|v|A|977
8G31|1|v|A|978
8G31|1|v|C|979
8G31|1|v|C|980
8G31|1|v|U|981
8G31|1|v|U|982
8G31|1|v|A|983
8G31|1|v|C|984
8G31|1|v|C|985
8G31|1|v|U|986
8G31|1|v|G|987
*
8G31|1|v|C|1217
8G31|1|v|C|1218
8G31|1|v|A|1219
8G31|1|v|G|1220
8G31|1|v|G|1221
8G31|1|v|G|1222
8G31|1|v|C|1223
8G31|1|v|U|1224
8G31|1|v|A|1225
8G31|1|v|C|1226
8G31|1|v|A|1227
8G31|1|v|C|1228

Current chains

Chain v
16S

Nearby chains

Chain h
30S ribosomal protein S9
Chain i
30S ribosomal protein S10
Chain l
30S ribosomal protein S13
Chain m
30S ribosomal protein S14
Chain r
30S ribosomal protein S19

Coloring options:

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