J3_8G38_014
3D structure
- PDB id
- 8G38 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Time-resolved cryo-EM study of the 70S recycling by the HflX:3rd Intermediate
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UCUUG*CAG*CUUACG
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8G38_014 not in the Motif Atlas
- Geometric match to J3_4LFB_005
- Geometric discrepancy: 0.3012
- The information below is about J3_4LFB_005
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_82572.1
- Basepair signature
- cWW-tSH-tWW-F-cWW-tHW-F-F-cWW
- Number of instances in this motif group
- 2
Unit IDs
8G38|1|v|U|989
8G38|1|v|C|990
8G38|1|v|U|991
8G38|1|v|U|992
8G38|1|v|G|993
*
8G38|1|v|C|1045
8G38|1|v|A|1046
8G38|1|v|G|1047
*
8G38|1|v|C|1210
8G38|1|v|U|1211
8G38|1|v|U|1212
8G38|1|v|A|1213
8G38|1|v|C|1214
8G38|1|v|G|1215
Current chains
- Chain v
- 16S
Nearby chains
- Chain m
- 30S ribosomal protein S14
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