J3_8G5Y_007

3D structure

PDB id

8G5Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (IC state)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.29 Å

Loop

Sequence

AGAUG*CAGU*AGGGUGUAAAU

Length

20 nucleotides

Bulged bases

8G5Y|1|L5|U|2763

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G5Y|1|L5|A|2551
8G5Y|1|L5|G|2552
8G5Y|1|L5|A|2553
8G5Y|1|L5|U|2554
8G5Y|1|L5|G|2555
*
8G5Y|1|L5|C|2572
8G5Y|1|L5|A|2573
8G5Y|1|L5|G|2574
8G5Y|1|L5|U|2575
*
8G5Y|1|L5|A|2757
8G5Y|1|L5|G|2758
8G5Y|1|L5|G|2759
8G5Y|1|L5|G|2760
8G5Y|1|L5|U|2761
8G5Y|1|L5|G|2762
8G5Y|1|L5|U|2763
8G5Y|1|L5|A|2764
8G5Y|1|L5|A|2765
8G5Y|1|L5|A|2766
8G5Y|1|L5|U|2767

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LZ

60S ribosomal protein L27