J3_8G60_041
3D structure
- PDB id
- 8G60 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.54 Å
Loop
- Sequence
- CCAUAC*GG*UG
- Length
- 10 nucleotides
- Bulged bases
- 8G60|1|L7|U|12
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8G60_041 not in the Motif Atlas
- Homologous match to J3_8P9A_066
- Geometric discrepancy: 0.0692
- The information below is about J3_8P9A_066
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_26985.1
- Basepair signature
- cWW-F-cWW-tSS-F-cWW
- Number of instances in this motif group
- 7
Unit IDs
8G60|1|L7|C|9
8G60|1|L7|C|10
8G60|1|L7|A|11
8G60|1|L7|U|12
8G60|1|L7|A|13
8G60|1|L7|C|14
*
8G60|1|L7|G|65
8G60|1|L7|G|66
*
8G60|1|L7|U|109
8G60|1|L7|G|110
Current chains
- Chain L7
- 5S rRNA
Nearby chains
- Chain L5
- Large subunit ribosomal RNA; LSU rRNA
- Chain LD
- uL18
- Chain LI
- uL16
- Chain LT
- eL21
Coloring options: