J3_8G60_044
3D structure
- PDB id
- 8G60 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.54 Å
Loop
- Sequence
- AGAUUAAG*CGCGC(A2M)AAU*(A2M)GU
- Length
- 20 nucleotides
- Bulged bases
- 8G60|1|S2|A|46
- QA status
- Modified nucleotides: A2M
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8G60_044 not in the Motif Atlas
- Homologous match to J3_8P9A_069
- Geometric discrepancy: 0.0586
- The information below is about J3_8P9A_069
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_46317.4
- Basepair signature
- cWW-cWW-cSW-F-cWW-F-F-F-F-cWW-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
8G60|1|S2|A|40
8G60|1|S2|G|41
8G60|1|S2|A|42
8G60|1|S2|U|43
8G60|1|S2|U|44
8G60|1|S2|A|45
8G60|1|S2|A|46
8G60|1|S2|G|47
*
8G60|1|S2|C|479
8G60|1|S2|G|480
8G60|1|S2|C|481
8G60|1|S2|G|482
8G60|1|S2|C|483
8G60|1|S2|A2M|484
8G60|1|S2|A|485
8G60|1|S2|A|486
8G60|1|S2|U|487
*
8G60|1|S2|A2M|512
8G60|1|S2|G|513
8G60|1|S2|U|514
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain EF
- eEF1A
- Chain SJ
- uS4
- Chain SX
- uS12
Coloring options: