J3_8G7P_026

3D structure

PDB id

8G7P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Escherichia coli 70S ribosome in complex with EF-Tu and Ile-tRNAIle(LAU) bound to the cognate AUA codon (Structure I)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGGACG*CC*GAAAAGC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_8G7P_026 not in the Motif Atlas

Homologous match to J3_7A0S_019

Geometric discrepancy: 0.1225

The information below is about J3_7A0S_019

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_34864.3

Basepair signature

cWW-tSH-tSH-tHH-F-F-cWW-F-cWW

Number of instances in this motif group

4

Unit IDs

8G7P|1|A|G|1424
8G7P|1|A|G|1425
8G7P|1|A|G|1426
8G7P|1|A|A|1427
8G7P|1|A|C|1428
8G7P|1|A|G|1429
*
8G7P|1|A|C|1564
8G7P|1|A|C|1565
*
8G7P|1|A|G|1568
8G7P|1|A|A|1569
8G7P|1|A|A|1570
8G7P|1|A|A|1571
8G7P|1|A|A|1572
8G7P|1|A|G|1573
8G7P|1|A|C|1574

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain C

50S ribosomal protein L2