J3_8GHU_004

3D structure

PDB id

8GHU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methyltransferase RmtC bound to the 30S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GCCUAACAC*GUGGGGAAUAUUG*CAGC

Length

26 nucleotides

Bulged bases

8GHU|1|a|C|48, 8GHU|1|a|A|50, 8GHU|1|a|A|51, 8GHU|1|a|U|368

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8GHU|1|a|G|46
8GHU|1|a|C|47
8GHU|1|a|C|48
8GHU|1|a|U|49
8GHU|1|a|A|50
8GHU|1|a|A|51
8GHU|1|a|C|52
8GHU|1|a|A|53
8GHU|1|a|C|54
*
8GHU|1|a|G|357
8GHU|1|a|U|358
8GHU|1|a|G|359
8GHU|1|a|G|360
8GHU|1|a|G|361
8GHU|1|a|G|362
8GHU|1|a|A|363
8GHU|1|a|A|364
8GHU|1|a|U|365
8GHU|1|a|A|366
8GHU|1|a|U|367
8GHU|1|a|U|368
8GHU|1|a|G|369
*
8GHU|1|a|C|392
8GHU|1|a|A|393
8GHU|1|a|G|394
8GHU|1|a|C|395

Current chains

Chain a

16S rRNA

Nearby chains

Chain l

30S ribosomal protein S12

Chain p

30S ribosomal protein S16