J3_8GHU_005

3D structure

PDB id

8GHU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methyltransferase RmtC bound to the 30S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GAG*CAUAACGUCGCAAGACCAAAGA*UUGC

Length

29 nucleotides

Bulged bases

8GHU|1|a|C|183, 8GHU|1|a|A|197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8GHU|1|a|G|142
8GHU|1|a|A|143
8GHU|1|a|G|144
*
8GHU|1|a|C|178
8GHU|1|a|A|179
8GHU|1|a|U|180
8GHU|1|a|A|181
8GHU|1|a|A|182
8GHU|1|a|C|183
8GHU|1|a|G|184
8GHU|1|a|U|185
8GHU|1|a|C|186
8GHU|1|a|G|187
8GHU|1|a|C|188
8GHU|1|a|A|189
8GHU|1|a|A|190
8GHU|1|a|G|191
8GHU|1|a|A|192
8GHU|1|a|C|193
8GHU|1|a|C|194
8GHU|1|a|A|195
8GHU|1|a|A|196
8GHU|1|a|A|197
8GHU|1|a|G|198
8GHU|1|a|A|199
*
8GHU|1|a|U|218
8GHU|1|a|U|219
8GHU|1|a|G|220
8GHU|1|a|C|221

Current chains

Chain a

16S rRNA

Nearby chains

Chain t

30S ribosomal protein S20