Loop J3_8GHU

3D structure

PDB id: 8GHU (explore in PDB, NAKB, or RNA 3D Hub)
Description: Methyltransferase RmtC bound to the 30S ribosomal subunit
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å

Loop

Sequence: CGGUUUGUUAAGU*AUACUGGCAAGCUUGAGUCUCGUAGAG*UGGACGAAGACUGACG
Length: 56 nucleotides
Bulged bases: 8GHU|1|a|U|653, 8GHU|1|a|A|665, 8GHU|1|a|A|747, 8GHU|1|a|C|754
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

8GHU|1|a|C|586
8GHU|1|a|G|587
8GHU|1|a|G|588
8GHU|1|a|U|589
8GHU|1|a|U|590
8GHU|1|a|U|591
8GHU|1|a|G|592
8GHU|1|a|U|593
8GHU|1|a|U|594
8GHU|1|a|A|595
8GHU|1|a|A|596
8GHU|1|a|G|597
8GHU|1|a|U|598
*
8GHU|1|a|A|640
8GHU|1|a|U|641
8GHU|1|a|A|642
8GHU|1|a|C|643
8GHU|1|a|U|644
8GHU|1|a|G|645
8GHU|1|a|G|646
8GHU|1|a|C|647
8GHU|1|a|A|648
8GHU|1|a|A|649
8GHU|1|a|G|650
8GHU|1|a|C|651
8GHU|1|a|U|652
8GHU|1|a|U|653
8GHU|1|a|G|654
8GHU|1|a|A|655
8GHU|1|a|G|656
8GHU|1|a|U|657
8GHU|1|a|C|658
8GHU|1|a|U|659
8GHU|1|a|C|660
8GHU|1|a|G|661
8GHU|1|a|U|662
8GHU|1|a|A|663
8GHU|1|a|G|664
8GHU|1|a|A|665
8GHU|1|a|G|666
*
8GHU|1|a|U|740
8GHU|1|a|G|741
8GHU|1|a|G|742
8GHU|1|a|A|743
8GHU|1|a|C|744
8GHU|1|a|G|745
8GHU|1|a|A|746
8GHU|1|a|A|747
8GHU|1|a|G|748
8GHU|1|a|A|749
8GHU|1|a|C|750
8GHU|1|a|U|751
8GHU|1|a|G|752
8GHU|1|a|A|753
8GHU|1|a|C|754
8GHU|1|a|G|755

Current chains

Chain a: 16S rRNA

Nearby chains

Chain f: 30S ribosomal protein S6, non-modified isoform
Chain h: 30S ribosomal protein S8
Chain l: 30S ribosomal protein S12
Chain o: 30S ribosomal protein S15
Chain q: 30S ribosomal protein S17
Chain r: 30S ribosomal protein S18

J3_8GHU_009