J3_8HL2_018

3D structure

PDB id

8HL2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.1 Å

Loop

Sequence

UUC*GGUUGAU*AAUCA

Length

15 nucleotides

Bulged bases

8HL2|1|A23S|U|2947

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8HL2|1|A23S|U|2928
8HL2|1|A23S|U|2929
8HL2|1|A23S|C|2930
*
8HL2|1|A23S|G|2944
8HL2|1|A23S|G|2945
8HL2|1|A23S|U|2946
8HL2|1|A23S|U|2947
8HL2|1|A23S|G|2948
8HL2|1|A23S|A|2949
8HL2|1|A23S|U|2950
*
8HL2|1|A23S|A|3008
8HL2|1|A23S|A|3009
8HL2|1|A23S|U|3010
8HL2|1|A23S|C|3011
8HL2|1|A23S|A|3012

Current chains

Chain A23S

23s rRNA (3000-MER)

Nearby chains

Chain AL3P

50S ribosomal protein L3

Chain L22P

50S ribosomal protein L22

Chain L31E

50S ribosomal protein L31e