J3_8HL2_032

3D structure

PDB id

8HL2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.1 Å

Loop

Sequence

ACGA*UAGAGUAC*GGAAGU

Length

18 nucleotides

Bulged bases

8HL2|1|A23S|C|292, 8HL2|1|A23S|G|416

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8HL2|1|A23S|A|291
8HL2|1|A23S|C|292
8HL2|1|A23S|G|293
8HL2|1|A23S|A|294
*
8HL2|1|A23S|U|414
8HL2|1|A23S|A|415
8HL2|1|A23S|G|416
8HL2|1|A23S|A|417
8HL2|1|A23S|G|418
8HL2|1|A23S|U|419
8HL2|1|A23S|A|420
8HL2|1|A23S|C|421
*
8HL2|1|A23S|G|442
8HL2|1|A23S|G|443
8HL2|1|A23S|A|444
8HL2|1|A23S|A|445
8HL2|1|A23S|G|446
8HL2|1|A23S|U|447

Current chains

Chain A23S

23s rRNA (3000-MER)

Nearby chains

Chain L15E

50S ribosomal protein L15e

Chain L7A1

50S ribosomal protein L7Ae