J3_8INF_007

3D structure

PDB id

8INF (explore in PDB, NAKB, or RNA 3D Hub)

Description

human nuclear pre-60S ribosomal particle - State F'

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

AGAUG*CAGU*AGGGUGUAAAU

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8INF|1|2|A|2551
8INF|1|2|G|2552
8INF|1|2|A|2553
8INF|1|2|U|2554
8INF|1|2|G|2555
*
8INF|1|2|C|2572
8INF|1|2|A|2573
8INF|1|2|G|2574
8INF|1|2|U|2575
*
8INF|1|2|A|2757
8INF|1|2|G|2758
8INF|1|2|G|2759
8INF|1|2|G|2760
8INF|1|2|U|2761
8INF|1|2|G|2762
8INF|1|2|U|2763
8INF|1|2|A|2764
8INF|1|2|A|2765
8INF|1|2|A|2766
8INF|1|2|U|2767

Current chains

Chain 2

28S rRNA

Nearby chains

Chain i

60S ribosomal protein L27

Chain v

Pescadillo homolog

Chain w

Ribosome biogenesis protein NOP53