J3_8IP8_002

3D structure

PDB id

8IP8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Wheat 80S ribosome stalled on AUG-Stop boron dependently

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGAUG*UGG*CUGCG

Length

13 nucleotides

Bulged bases

8IP8|1|RB|C|624

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IP8|1|RB|C|437
8IP8|1|RB|G|438
8IP8|1|RB|A|439
8IP8|1|RB|U|440
8IP8|1|RB|G|441
*
8IP8|1|RB|U|496
8IP8|1|RB|G|497
8IP8|1|RB|G|498
*
8IP8|1|RB|C|621
8IP8|1|RB|U|622
8IP8|1|RB|G|623
8IP8|1|RB|C|624
8IP8|1|RB|G|625

Current chains

Chain RB

60S ribosomal RNA

Nearby chains

Chain LB

60S ribosomal protein eL6

Chain MB

60S ribosomal protein eL33

Chain QA

60S ribosomal protein eL28

Chain TA

60S ribosomal protein eL32