J3_8IP8_009
3D structure
- PDB id
- 8IP8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Wheat 80S ribosome stalled on AUG-Stop boron dependently
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- AAG*CCUUUUGGCUCCAAG*CGAU
- Length
- 22 nucleotides
- Bulged bases
- 8IP8|1|RB|C|2544, 8IP8|1|RB|U|2545, 8IP8|1|RB|U|2546, 8IP8|1|RB|U|2547, 8IP8|1|RB|U|2548, 8IP8|1|RB|G|2549
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8IP8|1|RB|A|2526
8IP8|1|RB|A|2527
8IP8|1|RB|G|2528
*
8IP8|1|RB|C|2543
8IP8|1|RB|C|2544
8IP8|1|RB|U|2545
8IP8|1|RB|U|2546
8IP8|1|RB|U|2547
8IP8|1|RB|U|2548
8IP8|1|RB|G|2549
8IP8|1|RB|G|2550
8IP8|1|RB|C|2551
8IP8|1|RB|U|2552
8IP8|1|RB|C|2553
8IP8|1|RB|C|2554
8IP8|1|RB|A|2555
8IP8|1|RB|A|2556
8IP8|1|RB|G|2557
*
8IP8|1|RB|C|2575
8IP8|1|RB|G|2576
8IP8|1|RB|A|2577
8IP8|1|RB|U|2578
Current chains
- Chain RB
- 60S ribosomal RNA
Nearby chains
- Chain AA
- 40S ribosomal protein eL8
- Chain CA
- 60S ribosomal protein eL27
- Chain DA
- 60S ribosomal protein uL2
- Chain GB
- 60S ribosomal protein eL43
- Chain PB
- 60S ribosomal protein eL34
- Chain RA
- 60S ribosomal protein eL30
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