J3_8IP8_036
3D structure
- PDB id
- 8IP8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Wheat 80S ribosome stalled on AUG-Stop boron dependently
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CGCCCCG*CCCGUGCCAUUG*CUCGAAGCUCCCUUCCCAACG
- Length
- 40 nucleotides
- Bulged bases
- 8IP8|1|RB|C|3206, 8IP8|1|RB|A|3254, 8IP8|1|RB|C|3256, 8IP8|1|RB|C|3258, 8IP8|1|RB|U|3261, 8IP8|1|RB|U|3262, 8IP8|1|RB|C|3263
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8IP8|1|RB|C|3161
8IP8|1|RB|G|3162
8IP8|1|RB|C|3163
8IP8|1|RB|C|3164
8IP8|1|RB|C|3165
8IP8|1|RB|C|3166
8IP8|1|RB|G|3167
*
8IP8|1|RB|C|3200
8IP8|1|RB|C|3201
8IP8|1|RB|C|3202
8IP8|1|RB|G|3203
8IP8|1|RB|U|3204
8IP8|1|RB|G|3205
8IP8|1|RB|C|3206
8IP8|1|RB|C|3207
8IP8|1|RB|A|3208
8IP8|1|RB|U|3209
8IP8|1|RB|U|3210
8IP8|1|RB|G|3211
*
8IP8|1|RB|C|3249
8IP8|1|RB|U|3250
8IP8|1|RB|C|3251
8IP8|1|RB|G|3252
8IP8|1|RB|A|3253
8IP8|1|RB|A|3254
8IP8|1|RB|G|3255
8IP8|1|RB|C|3256
8IP8|1|RB|U|3257
8IP8|1|RB|C|3258
8IP8|1|RB|C|3259
8IP8|1|RB|C|3260
8IP8|1|RB|U|3261
8IP8|1|RB|U|3262
8IP8|1|RB|C|3263
8IP8|1|RB|C|3264
8IP8|1|RB|C|3265
8IP8|1|RB|A|3266
8IP8|1|RB|A|3267
8IP8|1|RB|C|3268
8IP8|1|RB|G|3269
Current chains
- Chain RB
- 60S ribosomal RNA
Nearby chains
- Chain FB
- 60S ribosomal protein uL13
- Chain LB
- 60S ribosomal protein eL6
- Chain MB
- 60S ribosomal protein eL33
- Chain XA
- 60S ribosomal protein eL14
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