J3_8IP8_037

3D structure

PDB id

8IP8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Wheat 80S ribosome stalled on AUG-Stop boron dependently

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CU*AAAUACG*CACG

Length

13 nucleotides

Bulged bases

8IP8|1|RB|C|3306, 8IP8|1|RB|C|3378

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IP8|1|RB|C|3286
8IP8|1|RB|U|3287
*
8IP8|1|RB|A|3301
8IP8|1|RB|A|3302
8IP8|1|RB|A|3303
8IP8|1|RB|U|3304
8IP8|1|RB|A|3305
8IP8|1|RB|C|3306
8IP8|1|RB|G|3307
*
8IP8|1|RB|C|3376
8IP8|1|RB|A|3377
8IP8|1|RB|C|3378
8IP8|1|RB|G|3379

Current chains

Chain RB

60S ribosomal RNA

Nearby chains

Chain DB

60S ribosomal protein uL3

Chain MA

60S ribosomal protein uL22

Chain SA

60S ribosomal protein eL31