J3_8IP8_043
3D structure
- PDB id
- 8IP8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Wheat 80S ribosome stalled on AUG-Stop boron dependently
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UGGA*UUAAUAG*CAUUA
- Length
- 16 nucleotides
- Bulged bases
- 8IP8|1|aa|U|869
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8IP8|1|aa|U|637
8IP8|1|aa|G|638
8IP8|1|aa|G|639
8IP8|1|aa|A|640
*
8IP8|1|aa|U|865
8IP8|1|aa|U|866
8IP8|1|aa|A|867
8IP8|1|aa|A|868
8IP8|1|aa|U|869
8IP8|1|aa|A|870
8IP8|1|aa|G|871
*
8IP8|1|aa|C|967
8IP8|1|aa|A|968
8IP8|1|aa|U|969
8IP8|1|aa|U|970
8IP8|1|aa|A|971
Current chains
- Chain aa
- 18S ribosomal RNA
Nearby chains
- Chain ga
- 40S ribosomal protein uS12
- Chain hb
- 40S ribosomal protein eS7
- Chain ib
- 40S ribosomal protein uS17
- Chain pa
- 40S ribosomal protein uS15
- Chain va
- 40S ribosomal protein uS8
- Chain xa
- 40S ribosomal protein eS27
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