J3_8IP9_012

3D structure

PDB id

8IP9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Wheat 40S ribosome in complex with a tRNAi

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UGGA*UUAAUA*UA

Length

12 nucleotides

Bulged bases

8IP9|1|aa|U|869

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IP9|1|aa|U|637
8IP9|1|aa|G|638
8IP9|1|aa|G|639
8IP9|1|aa|A|640
*
8IP9|1|aa|U|865
8IP9|1|aa|U|866
8IP9|1|aa|A|867
8IP9|1|aa|A|868
8IP9|1|aa|U|869
8IP9|1|aa|A|870
*
8IP9|1|aa|U|970
8IP9|1|aa|A|971

Current chains

Chain aa

18S ribosomal RNA

Nearby chains

Chain ga

40S ribosomal protein S23

Chain hb

40S ribosomal protein eS7

Chain ib

40S ribosomal protein uS17

Chain pa

40S ribosomal protein uS15

Chain va

40S ribosomal protein uS8

Chain xa

40S ribosomal protein eS27