J3_8IR3_007

3D structure

PDB id

8IR3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

human nuclear pre-60S ribosomal particle - State B'

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

AGAUG*CAGU*AGGGUGUAAAU

Length

20 nucleotides

Bulged bases

8IR3|1|2|U|2763

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IR3|1|2|A|2551
8IR3|1|2|G|2552
8IR3|1|2|A|2553
8IR3|1|2|U|2554
8IR3|1|2|G|2555
*
8IR3|1|2|C|2572
8IR3|1|2|A|2573
8IR3|1|2|G|2574
8IR3|1|2|U|2575
*
8IR3|1|2|A|2757
8IR3|1|2|G|2758
8IR3|1|2|G|2759
8IR3|1|2|G|2760
8IR3|1|2|U|2761
8IR3|1|2|G|2762
8IR3|1|2|U|2763
8IR3|1|2|A|2764
8IR3|1|2|A|2765
8IR3|1|2|A|2766
8IR3|1|2|U|2767

Current chains

Chain 2

28S rRNA

Nearby chains

Chain f

Ribosome biogenesis protein NOP53

Chain i

60S ribosomal protein L27

Chain q

Pescadillo homolog