J3_8JSG_015

3D structure

PDB id

8JSG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 30S-IF3 complex from Escherichia coli

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

GAAGUUUU*AGAAUGUGC*GAAC

Length

21 nucleotides

Bulged bases

8JSG|1|g|A|1005, 8JSG|1|g|A|1036

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8JSG|1|g|G|1003
8JSG|1|g|A|1004
8JSG|1|g|A|1005
8JSG|1|g|G|1006
8JSG|1|g|U|1007
8JSG|1|g|U|1008
8JSG|1|g|U|1009
8JSG|1|g|U|1010
*
8JSG|1|g|A|1019
8JSG|1|g|G|1020
8JSG|1|g|A|1021
8JSG|1|g|A|1022
8JSG|1|g|U|1023
8JSG|1|g|G|1024
8JSG|1|g|U|1025
8JSG|1|g|G|1026
8JSG|1|g|C|1027
*
8JSG|1|g|G|1034
8JSG|1|g|A|1035
8JSG|1|g|A|1036
8JSG|1|g|C|1037

Current chains

Chain g

16S ribosomal RNA

Nearby chains

Chain w

Small ribosomal subunit protein uS14