J3_8JSG_016

3D structure

PDB id

8JSG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 30S-IF3 complex from Escherichia coli

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

UGUU*AAUGUUG*CGCAA

Length

16 nucleotides

Bulged bases

8JSG|1|g|U|1086, 8JSG|1|g|A|1101

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8JSG|1|g|U|1073
8JSG|1|g|G|1074
8JSG|1|g|U|1075
8JSG|1|g|U|1076
*
8JSG|1|g|A|1081
8JSG|1|g|A|1082
8JSG|1|g|U|1083
8JSG|1|g|G|1084
8JSG|1|g|U|1085
8JSG|1|g|U|1086
8JSG|1|g|G|1087
*
8JSG|1|g|C|1098
8JSG|1|g|G|1099
8JSG|1|g|C|1100
8JSG|1|g|A|1101
8JSG|1|g|A|1102

Current chains

Chain g

16S ribosomal RNA

Nearby chains

Chain 2

Small ribosomal subunit protein bS21

Chain j

Small ribosomal subunit protein uS2

Chain k

Small ribosomal subunit protein uS5