J3_8OIN_013

3D structure

PDB id

8OIN (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UUCU*AUUAG*CAAA

Length

13 nucleotides

Bulged bases

8OIN|1|AA|U|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OIN|1|AA|U|31
8OIN|1|AA|U|32
8OIN|1|AA|C|33
8OIN|1|AA|U|34
*
8OIN|1|AA|A|222
8OIN|1|AA|U|223
8OIN|1|AA|U|224
8OIN|1|AA|A|225
8OIN|1|AA|G|226
*
8OIN|1|AA|C|271
8OIN|1|AA|A|272
8OIN|1|AA|A|273
8OIN|1|AA|A|274

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AJ

Mitochondrial ribosomal protein S12

Chain AO

28S ribosomal protein S18b, mitochondrial