J3_8OIN_022

3D structure

PDB id

8OIN (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CAUUU*AUAUCCACCACAC*GGAG

Length

22 nucleotides

Bulged bases

8OIN|1|AA|U|724

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OIN|1|AA|C|721
8OIN|1|AA|A|722
8OIN|1|AA|U|723
8OIN|1|AA|U|724
8OIN|1|AA|U|725
*
8OIN|1|AA|A|737
8OIN|1|AA|U|738
8OIN|1|AA|A|739
8OIN|1|AA|U|740
8OIN|1|AA|C|741
8OIN|1|AA|C|742
8OIN|1|AA|A|743
8OIN|1|AA|C|744
8OIN|1|AA|C|745
8OIN|1|AA|A|746
8OIN|1|AA|C|747
8OIN|1|AA|A|748
8OIN|1|AA|C|749
*
8OIN|1|AA|G|778
8OIN|1|AA|G|779
8OIN|1|AA|A|780
8OIN|1|AA|G|781

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AF

Mitochondrial ribosomal protein S7

Chain AX

Death associated protein 3

Chain Bp

Mitochondrial ribosomal protein L40

Chain Bv

Mitochondrial ribosomal protein L46

Chain Bw

39S ribosomal protein L48, mitochondrial