J3_8OIR_001

3D structure

PDB id

8OIR (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S human mitochondrial ribosome with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUCU*ACCCCAG*CAAG

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OIR|1|AA|C|30
8OIR|1|AA|U|31
8OIR|1|AA|C|32
8OIR|1|AA|U|33
*
8OIR|1|AA|A|219
8OIR|1|AA|C|220
8OIR|1|AA|C|221
8OIR|1|AA|C|222
8OIR|1|AA|C|223
8OIR|1|AA|A|224
8OIR|1|AA|G|225
*
8OIR|1|AA|C|270
8OIR|1|AA|A|271
8OIR|1|AA|A|272
8OIR|1|AA|G|273

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AJ

28S ribosomal protein S12, mitochondrial

Chain AO

28S ribosomal protein S18b, mitochondrial