J3_8OIR_002

3D structure

PDB id

8OIR (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S human mitochondrial ribosome with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GAUU*AUUAACCU*AGC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OIR|1|AA|G|40
8OIR|1|AA|A|41
8OIR|1|AA|U|42
8OIR|1|AA|U|43
*
8OIR|1|AA|A|176
8OIR|1|AA|U|177
8OIR|1|AA|U|178
8OIR|1|AA|A|179
8OIR|1|AA|A|180
8OIR|1|AA|C|181
8OIR|1|AA|C|182
8OIR|1|AA|U|183
*
8OIR|1|AA|A|209
8OIR|1|AA|G|210
8OIR|1|AA|C|211

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AJ

28S ribosomal protein S12, mitochondrial

Chain AM

28S ribosomal protein S16, mitochondrial

Chain AT

28S ribosomal protein S25, mitochondrial